Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rare lipoprotein a | PMI12_00145 | Not Available | + | 154462 - 155082 | 21631.0 |
| protein involved in catabolism of external dna | PMI12_00146 | Not Available | - | 155095 - 156045 | 34160.0 |
| ribosomal protein l13, bacterial type | PMI12_00147 | Not Available | + | 156243 - 156674 | 15750.2 |
| ribosomal protein s9 | PMI12_00148 | Not Available | + | 156687 - 157079 | 14318.3 |
| iron-sulfur cluster assembly accessory protein | PMI12_00149 | Not Available | + | 157295 - 157660 | 12923.1 |
| drug resistance transporter, emrb/qaca subfamily | PMI12_00150 | Not Available | + | 157741 - 159165 | 49769.4 |
| molecular chaperone | PMI12_00151 | Not Available | - | 159172 - 160296 | 38308.6 |
| metalloendopeptidase-like membrane protein | PMI12_00152 | Not Available | - | 160341 - 161687 | 47644.9 |
| tyrosyl-trna synthetase | PMI12_00153 | Not Available | + | 161872 - 163080 | 44115.8 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00154 | Not Available | - | 163089 - 163709 | 21987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
