Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had-superfamily hydrolase, subfamily iib | PMI12_00134 | Not Available | - | 142948 - 143796 | 30471.1 |
| abc-type uncharacterized transport system, atpase component | PMI12_00135 | Not Available | + | 143891 - 144886 | 36885.8 |
| abc-type uncharacterized transport system, permease component | PMI12_00136 | Not Available | + | 144886 - 145731 | 29757.3 |
| abc-type uncharacterized transport system, permease component | PMI12_00137 | Not Available | + | 145733 - 146536 | 28379.2 |
| peptide chain release factor 3 | PMI12_00138 | Not Available | - | 146546 - 148180 | 60547.8 |
| hypothetical protein | PMI12_00139 | Not Available | - | 148331 - 149785 | 52683.1 |
| phasin family protein | PMI12_00140 | Not Available | - | 150497 - 150988 | 17846.5 |
| adenosylhomocysteinase | PMI12_00142 | Not Available | + | 151320 - 152759 | 51910.3 |
| putative rrna methylase | PMI12_00143 | Not Available | + | 152770 - 153564 | 28173.5 |
| 5,10-methylenetetrahydrofolate reductase | PMI12_00144 | Not Available | + | 153575 - 154399 | 29858.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.