Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent nitrite reductase, small subunit | PMI12_00114 | Not Available | - | 115888 - 116229 | 11997.4 |
| nad(p)h-dependent nitrite reductase, large subunit | PMI12_00115 | Not Available | - | 116250 - 118781 | 91529.9 |
| hypothetical protein | PMI12_00116 | Not Available | + | 119176 - 119664 | 17404.9 |
| putative fe-s protein | PMI12_00117 | Not Available | + | 119661 - 119918 | 9471.18 |
| 2-hydroxychromene-2-carboxylate isomerase | PMI12_00118 | Not Available | + | 119915 - 120559 | 23796.2 |
| arabinose efflux permease family protein | PMI12_00119 | Not Available | + | 120730 - 122424 | 60492.5 |
| hypothetical protein | PMI12_00120 | Not Available | + | 122544 - 122690 | 4940.01 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_00121 | Not Available | - | 122709 - 123824 | 38865.1 |
| excinuclease abc, a subunit | PMI12_00122 | Not Available | + | 123976 - 129852 | 212347.0 |
| succinate-semialdehyde dehydrogenase | PMI12_00123 | Not Available | - | 129892 - 131370 | 52562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.