Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI12_00104 | Not Available | + | 106146 - 107066 | 33918.0 |
| transcriptional regulator | PMI12_00105 | Not Available | + | 107159 - 107908 | 27390.2 |
| hypothetical protein | PMI12_00106 | Not Available | + | 107905 - 108294 | 14271.1 |
| hypothetical protein | PMI12_00107 | Not Available | + | 108320 - 109336 | 35405.0 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_00108 | Not Available | + | 109458 - 110684 | 43666.3 |
| acyl-coa dehydrogenase | PMI12_00109 | Not Available | + | 110681 - 111850 | 42268.9 |
| acylphosphatase | PMI12_00110 | Not Available | + | 111861 - 112166 | 10695.8 |
| isopropylmalate/homocitrate/citramalate synthase | PMI12_00111 | Not Available | + | 112335 - 113255 | 32569.2 |
| protein kinase family protein | PMI12_00112 | Not Available | - | 113271 - 115013 | 63573.7 |
| formate/nitrite transporter family protein | PMI12_00113 | Not Available | - | 115024 - 115836 | 28803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.