Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00073 | Not Available | + | 72980 - 73147 | 6135.77 |
| theronine dehydrogenase-like zn-dependent dehydrogenase | PMI12_00074 | Not Available | - | 73212 - 74249 | 36257.8 |
| putative membrane protein | PMI12_00075 | Not Available | + | 74360 - 75616 | 41870.1 |
| ribonucleotide reductase, alpha subunit | PMI12_00076 | Not Available | - | 75623 - 75838 | 7736.27 |
| universal stress protein uspa-like protein | PMI12_00077 | Not Available | + | 75932 - 76765 | 29987.5 |
| surface antigen | PMI12_00078 | Not Available | - | 77054 - 77440 | 13299.6 |
| fatty-acid desaturase | PMI12_00079 | Not Available | - | 77466 - 78650 | 44168.6 |
| acyl-coa synthetase (ndp forming) | PMI12_00080 | Not Available | + | 79244 - 81934 | 94985.1 |
| molecular chaperone (small heat shock protein) | PMI12_00081 | Not Available | + | 82160 - 82585 | 15860.9 |
| deacetylase, histone deacetylase/acetoin utilization protein | PMI12_00082 | Not Available | + | 82656 - 83582 | 32954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.