Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase/lipase | PMI12_00972 | Not Available | Negative | 993003 - 993944 | 33403.7 |
| phosphoribosylglycinamide formyltransferase 2 | PMI12_00973 | Not Available | Negative | 994028 - 995230 | 42612.2 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_00974 | Not Available | Positive | 995417 - 996265 | 29906.9 |
| enoyl-coa hydratase/carnithine racemase | PMI12_00975 | Not Available | Positive | 996301 - 997116 | 29315.5 |
| penicillin-binding protein, beta-lactamase class c | PMI12_00976 | Not Available | Positive | 997139 - 998476 | 48065.3 |
| pantothenate kinase, type iii | PMI12_00977 | Not Available | Negative | 998484 - 999269 | 27745.6 |
| putative phospholipid-binding protein | PMI12_00978 | Not Available | Positive | 999405 - 999866 | 15806.7 |
| rhodanese-related sulfurtransferase | PMI12_00979 | Not Available | Negative | 1000044 - 1000454 | 14814.5 |
| putative transporter component | PMI12_00980 | Not Available | Negative | 1000489 - 1000917 | 14542.5 |
| putative transporter component | PMI12_00981 | Not Available | Negative | 1000938 - 1001375 | 14413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.