Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_00962 | Not Available | Positive | 983253 - 983999 | 25679.9 |
| membrane protein, marc family | PMI12_00963 | Not Available | Positive | 984002 - 984655 | 22865.8 |
| hypothetical protein | PMI12_00964 | Not Available | Negative | 984661 - 985122 | 17145.7 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_00965 | Not Available | Negative | 985290 - 986456 | 42635.5 |
| amp-forming long-chain acyl-coa synthetase | PMI12_00966 | Not Available | Negative | 986490 - 988346 | 68505.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_00967 | Not Available | Negative | 988352 - 989125 | 28636.9 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_00968 | Not Available | Negative | 989122 - 989940 | 29794.9 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_00969 | Not Available | Negative | 990086 - 991162 | 38609.1 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_00970 | Not Available | Negative | 991169 - 992044 | 30731.3 |
| dna-binding domain-containing protein, arac-type | PMI12_00971 | Not Available | Negative | 992060 - 992890 | 30089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.