Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00942 | Not Available | Negative | 965229 - 965666 | 15982.2 |
| hypothetical protein | PMI12_00943 | Not Available | Negative | 965696 - 966433 | 27196.5 |
| hypothetical protein | PMI12_00944 | Not Available | Negative | 966430 - 967134 | 24931.6 |
| sugar phosphate permease | PMI12_00945 | Not Available | Negative | 967568 - 968911 | 47520.9 |
| hypothetical protein | PMI12_00946 | Not Available | Negative | 968948 - 970021 | 39359.7 |
| translation elongation factor-like gtpase | PMI12_00947 | Not Available | Negative | 970154 - 970259 | 3659.49 |
| translation elongation factor ef-g | PMI12_00948 | Not Available | Negative | 970402 - 972501 | 77279.8 |
| ribosomal protein s7, bacterial/organelle | PMI12_00949 | Not Available | Negative | 972598 - 973071 | 18023.2 |
| ribosomal protein s12, bacterial/organelle | PMI12_00950 | Not Available | Negative | 973222 - 973530 | 11411.9 |
| d-alanyl-d-alanine carboxypeptidase | PMI12_00951 | Not Available | Negative | 973803 - 974972 | 41964.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.