Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | PMI12_00932 | Not Available | Negative | 957427 - 958902 | 52612.8 |
| hypothetical protein | PMI12_00933 | Not Available | Negative | 958980 - 959399 | 14228.0 |
| hypothetical protein | PMI12_00934 | Not Available | Negative | 959424 - 959702 | 9825.6 |
| glycerophosphoryl diester phosphodiesterase | PMI12_00935 | Not Available | Negative | 959699 - 960691 | 35525.7 |
| hypothetical protein | PMI12_00936 | Not Available | Negative | 960688 - 961269 | 21051.5 |
| abc-type polar amino acid transport system, atpase component | PMI12_00937 | Not Available | Negative | 961340 - 962125 | 28456.9 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00938 | Not Available | Negative | 962109 - 962762 | 23543.5 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00939 | Not Available | Negative | 962785 - 963447 | 23855.8 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_00940 | Not Available | Negative | 963567 - 964370 | 28436.6 |
| transcriptional regulator | PMI12_00941 | Not Available | Negative | 964367 - 965155 | 27913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.