Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette protein, chvd family | PMI12_00922 | Not Available | Positive | 946418 - 948079 | 61638.6 |
| hypothetical protein, gamma-carboxymuconolactone decarboxylase subunit like protein | PMI12_00923 | Not Available | Negative | 948243 - 948695 | 16068.1 |
| aminodeoxychorismate synthase, component i | PMI12_00924 | Not Available | Negative | 949162 - 950931 | 64370.9 |
| trap transporter solute receptor, taxi family | PMI12_00925 | Not Available | Negative | 950921 - 952300 | 50317.7 |
| l-aminopeptidase/d-esterase | PMI12_00926 | Not Available | Negative | 952317 - 953345 | 34170.1 |
| glycine/d-amino acid oxidase, deaminating | PMI12_00927 | Not Available | Positive | 953386 - 954678 | 45251.3 |
| hypothetical protein | PMI12_00928 | Not Available | Negative | 954702 - 954992 | 10094.5 |
| putative metal-binding protein | PMI12_00929 | Not Available | Negative | 955025 - 955471 | 15901.3 |
| putative copper-binding protein | PMI12_00930 | Not Available | Negative | 955482 - 956000 | 18531.5 |
| putative multicopper oxidase | PMI12_00931 | Not Available | Negative | 956034 - 957425 | 51012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.