Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-6-phosphogluconate aldolase | PMI12_00912 | Not Available | Negative | 934505 - 935146 | 21641.7 |
| 2-keto-3-deoxy-galactonokinase | PMI12_00913 | Not Available | Negative | 935143 - 936051 | 32224.7 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | PMI12_00914 | Not Available | Negative | 936169 - 937905 | 62851.1 |
| transcriptional regulator | PMI12_00915 | Not Available | Positive | 938056 - 938799 | 26804.5 |
| abc-type sugar transport system, periplasmic component | PMI12_00916 | Not Available | Positive | 938907 - 940289 | 51988.7 |
| permease component of abc-type sugar transporter | PMI12_00917 | Not Available | Positive | 940333 - 941211 | 32520.6 |
| abc-type sugar transport system, permease component | PMI12_00918 | Not Available | Positive | 941208 - 942059 | 31641.3 |
| atpase component of abc-type sugar transporter | PMI12_00919 | Not Available | Positive | 942079 - 943149 | 38884.0 |
| putative extracellular nuclease | PMI12_00920 | Not Available | Negative | 943153 - 944166 | 37798.9 |
| dna/rna helicase, superfamily ii | PMI12_00921 | Not Available | Negative | 944304 - 946106 | 62821.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.