Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type fe3+ transport system, periplasmic component | PMI12_00902 | Not Available | Negative | 924714 - 925769 | 37366.9 |
| dna-binding transcriptional activator of the sarp family | PMI12_00903 | Not Available | Negative | 925847 - 927703 | 65295.5 |
| hypothetical protein | PMI12_00904 | Not Available | Negative | 927752 - 928027 | 9759.57 |
| transcriptional regulator | PMI12_00905 | Not Available | Negative | 928131 - 929093 | 34949.0 |
| hypothetical protein | PMI12_00906 | Not Available | Negative | 929097 - 929645 | 19544.8 |
| transcriptional regulator | PMI12_00907 | Not Available | Positive | 929721 - 930176 | 16606.8 |
| sugar phosphate permease | PMI12_00908 | Not Available | Positive | 930286 - 931599 | 46261.8 |
| putative efflux protein, mate family | PMI12_00909 | Not Available | Positive | 931618 - 933033 | 48776.0 |
| hypothetical protein | PMI12_00910 | Not Available | Negative | 933217 - 933537 | 12168.3 |
| ribulose-5-phosphate 4-epimerase-like epimerase or aldolase | PMI12_00911 | Not Available | Negative | 933732 - 934469 | 26547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.