Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein involved in cation transport | PMI12_00892 | Not Available | Negative | 915536 - 916285 | 27864.1 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00893 | Not Available | Positive | 916376 - 916933 | 18879.7 |
| 6-phosphogluconate dehydratase | PMI12_00894 | Not Available | Positive | 917135 - 918976 | 64634.8 |
| entner-doudoroff aldolase | PMI12_00895 | Not Available | Positive | 919136 - 919771 | 21877.7 |
| 2-haloalkanoic acid dehalogenase, type ii | PMI12_00896 | Not Available | Positive | 919774 - 920502 | 26336.6 |
| hypothetical protein | PMI12_00897 | Not Available | Negative | 920503 - 921036 | 19776.8 |
| lactoylglutathione lyase | PMI12_00898 | Not Available | Negative | 921036 - 921431 | 14112.7 |
| glutathione s-transferase | PMI12_00899 | Not Available | Negative | 921513 - 922202 | 25791.0 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_00900 | Not Available | Negative | 922308 - 922991 | 24133.2 |
| abc-type fe3+ transport system, permease component | PMI12_00901 | Not Available | Negative | 922988 - 924667 | 58644.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.