Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_00882 | Not Available | Negative | 906935 - 907660 | 26850.5 |
| methionine-s-sulfoxide reductase | PMI12_00883 | Not Available | Positive | 907765 - 908316 | 20184.6 |
| hypothetical protein | PMI12_00884 | Not Available | Positive | 908399 - 908710 | 10859.2 |
| outer membrane receptor protein | PMI12_00885 | Not Available | Positive | 908791 - 910884 | 75000.6 |
| putative permease | PMI12_00886 | Not Available | Positive | 910952 - 911992 | 36654.4 |
| hypothetical protein | PMI12_00887 | Not Available | Negative | 912132 - 912446 | 10100.9 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00888 | Not Available | Positive | 912510 - 913715 | 43548.0 |
| pyridoxamine-phosphate oxidase | PMI12_00889 | Not Available | Negative | 913728 - 914381 | 24600.0 |
| putative moba-like protein | PMI12_00890 | Not Available | Positive | 914420 - 914980 | 18898.8 |
| cu/zn superoxide dismutase | PMI12_00891 | Not Available | Negative | 915000 - 915539 | 17883.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.