Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00053 | Not Available | + | 54447 - 55460 | 36118.5 |
| tfp pilus assembly protein pilz | PMI12_00054 | Not Available | + | 55457 - 55837 | 13520.3 |
| hydrolase, tatd family | PMI12_00055 | Not Available | + | 55922 - 56728 | 29895.3 |
| ankyrin repeat-containing protein | PMI12_00056 | Not Available | + | 56725 - 57405 | 24309.3 |
| hypothetical protein | PMI12_00057 | Not Available | + | 57399 - 57611 | 7331.0 |
| hypothetical protein | PMI12_00058 | Not Available | - | 57728 - 58453 | 27188.4 |
| ntp pyrophosphohydrolase | PMI12_00059 | Not Available | - | 58561 - 59076 | 19248.1 |
| trypsin-like serine protease with c-terminal pdz domain containing protein | PMI12_00060 | Not Available | - | 59087 - 60529 | 49814.7 |
| universal stress protein uspa-like protein | PMI12_00061 | Not Available | - | 60530 - 60952 | 15262.5 |
| hypothetical protein | PMI12_00062 | Not Available | + | 61147 - 61674 | 18811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.