Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00872 | Not Available | Negative | 896515 - 897330 | 28623.9 |
| putative membrane protein | PMI12_00873 | Not Available | Positive | 897538 - 898200 | 23917.3 |
| putative permease, dmt superfamily | PMI12_00874 | Not Available | Negative | 898222 - 899163 | 32434.6 |
| o-6-methylguanine dna methyltransferase | PMI12_00875 | Not Available | Negative | 899193 - 899690 | 17706.2 |
| adenosine deaminase | PMI12_00876 | Not Available | Negative | 899697 - 901301 | 57097.4 |
| phosphomannomutase | PMI12_00877 | Not Available | Positive | 901413 - 902795 | 48504.4 |
| 3-deoxy-d-manno-octulosonic-acid transferase | PMI12_00878 | Not Available | Positive | 902800 - 904182 | 49506.5 |
| type i secretion outer membrane protein, tolc family | PMI12_00879 | Not Available | Negative | 904312 - 905850 | 53898.2 |
| rhodanese-related sulfurtransferase | PMI12_00880 | Not Available | Negative | 905872 - 906219 | 12517.8 |
| protein-l-isoaspartate carboxylmethyltransferase | PMI12_00881 | Not Available | Negative | 906236 - 906913 | 24879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.