Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase, nitrogen specific | PMI12_00852 | Not Available | Positive | 877809 - 878888 | 40184.2 |
| nitrogen regulation protein nr(i) | PMI12_00853 | Not Available | Positive | 878911 - 880443 | 55416.5 |
| hypothetical protein | PMI12_00854 | Not Available | Negative | 880546 - 881073 | 18614.6 |
| exodeoxyribonuclease iii | PMI12_00855 | Not Available | Negative | 881077 - 881862 | 29680.6 |
| sugar phosphate permease | PMI12_00856 | Not Available | Positive | 882267 - 883592 | 47225.5 |
| penicillin-binding protein, beta-lactamase class c | PMI12_00857 | Not Available | Positive | 883625 - 884818 | 43354.3 |
| maleate cis-trans isomerase | PMI12_00858 | Not Available | Positive | 884824 - 885552 | 26128.3 |
| d-hydantoinase | PMI12_00859 | Not Available | Positive | 885601 - 887028 | 52388.2 |
| hydantoin racemase | PMI12_00860 | Not Available | Positive | 887052 - 887813 | 26503.0 |
| transcriptional regulator | PMI12_00861 | Not Available | Positive | 887872 - 888588 | 26502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.