Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein related to regulatory domain of methyltransferases | PMI12_00842 | Not Available | Positive | 866800 - 868395 | 57966.8 |
| gamma-glutamyltranspeptidase | PMI12_00843 | Not Available | Positive | 868433 - 870169 | 61258.4 |
| pseudouridine synthase family protein | PMI12_00844 | Not Available | Positive | 870231 - 870980 | 27066.7 |
| hypothetical protein | PMI12_00845 | Not Available | Positive | 871071 - 872078 | 36348.6 |
| putative xylanase/chitin deacetylase | PMI12_00846 | Not Available | Positive | 872062 - 872874 | 29081.4 |
| sterol desaturase | PMI12_00847 | Not Available | Positive | 872888 - 873862 | 37018.5 |
| hypothetical protein | PMI12_00848 | Not Available | Positive | 873913 - 874803 | 31966.9 |
| putative nuleotide-utilizing enzyme, moea | PMI12_00849 | Not Available | Positive | 874800 - 875600 | 29085.2 |
| glutamine synthetase, type i | PMI12_00850 | Not Available | Positive | 875747 - 877162 | 52292.0 |
| hypothetical protein | PMI12_00851 | Not Available | Positive | 877298 - 877804 | 18062.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.