Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase, clade 2 | PMI12_00832 | Not Available | Negative | 857603 - 858727 | 40444.2 |
| phosphoserine aminotransferase | PMI12_00833 | Not Available | Negative | 858752 - 859882 | 40930.7 |
| hypothetical protein | PMI12_00834 | Not Available | Negative | 859890 - 860480 | 20925.4 |
| dna gyrase, a subunit | PMI12_00835 | Not Available | Negative | 860477 - 863122 | 98012.1 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00836 | Not Available | Positive | 863347 - 863997 | 22796.1 |
| ubiquinone biosynthesis o-methyltransferase | PMI12_00837 | Not Available | Positive | 864130 - 864858 | 26679.2 |
| tmrna | PMI12_00839 | Not Available | Positive | 864855 - 865523 | 24059.9 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 865536 - 865920 | Not Available |
| hypothetical protein | PMI12_00840 | Not Available | Negative | 865988 - 866191 | 7408.9 |
| hypothetical protein | PMI12_00841 | Not Available | Negative | 866201 - 866476 | 10302.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.