Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | PMI12_00822 | Not Available | Negative | 847253 - 848566 | 47272.6 |
| trap-type c4-dicarboxylate transport system, small permease component | PMI12_00823 | Not Available | Negative | 848595 - 849128 | 19602.1 |
| trap-type c4-dicarboxylate transport system, periplasmic component | PMI12_00824 | Not Available | Negative | 849218 - 850186 | 34748.7 |
| hypothetical protein | PMI12_00825 | Not Available | Negative | 850337 - 850663 | 11258.7 |
| putative n-acetylglucosaminyl transferase | PMI12_00826 | Not Available | Negative | 850802 - 851971 | 43530.3 |
| putative integral membrane protein | PMI12_00827 | Not Available | Negative | 851961 - 852296 | 11831.4 |
| integration host factor, beta subunit | PMI12_00828 | Not Available | Negative | 852354 - 852680 | 12064.5 |
| ribosomal protein s1 | PMI12_00829 | Not Available | Negative | 852759 - 854447 | 61853.8 |
| cytidylate kinase/3-phosphoshikimate 1-carboxyvinyltransferase | PMI12_00830 | Not Available | Negative | 854679 - 856691 | 71530.0 |
| prephenate dehydrogenase | PMI12_00831 | Not Available | Negative | 856693 - 857583 | 31438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.