Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI12_00802 | Not Available | Positive | 826682 - 827449 | 27630.6 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_00803 | Not Available | Positive | 827446 - 828159 | 25775.6 |
| amidase, hydantoinase/carbamoylase family | PMI12_00804 | Not Available | Positive | 828194 - 829450 | 44723.4 |
| hypothetical protein | PMI12_00805 | Not Available | Positive | 829447 - 830943 | 52887.5 |
| hypothetical protein | PMI12_00806 | Not Available | Positive | 831036 - 831413 | 13373.7 |
| transcriptional activator of acetoin/glycerol metabolism | PMI12_00807 | Not Available | Negative | 831453 - 832592 | 40776.7 |
| aerobic-type carbon monoxide dehydrogenase, small subunit coxs/cuts-like protein | PMI12_00808 | Not Available | Positive | 832772 - 833269 | 17379.0 |
| aerobic-type carbon monoxide dehydrogenase, large subunit coxl/cutl-like protein | PMI12_00809 | Not Available | Positive | 833283 - 835667 | 85276.5 |
| aerobic-type carbon monoxide dehydrogenase, middle subunit coxm/cutm-like protein | PMI12_00810 | Not Available | Positive | 835688 - 836479 | 27241.7 |
| moxr-like atpase | PMI12_00811 | Not Available | Positive | 836547 - 837449 | 33516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.