Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | PMI12_00792 | Not Available | Negative | 814994 - 816535 | 55457.6 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | PMI12_00793 | Not Available | Negative | 816594 - 817133 | 20109.1 |
| hypothetical protein | PMI12_00794 | Not Available | Positive | 817349 - 818611 | 47013.3 |
| arabinose efflux permease family protein | PMI12_00795 | Not Available | Negative | 818622 - 820061 | 51148.1 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PMI12_00796 | Not Available | Negative | 820116 - 821471 | 48283.9 |
| transcriptional regulator | PMI12_00797 | Not Available | Positive | 821578 - 822534 | 34887.2 |
| transcriptional regulator | PMI12_00798 | Not Available | Negative | 822658 - 823422 | 29340.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_00799 | Not Available | Positive | 823632 - 824837 | 42920.8 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_00800 | Not Available | Positive | 824860 - 825720 | 30368.5 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_00801 | Not Available | Positive | 825726 - 826685 | 34080.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.