Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative low-complexity protein | PMI12_00043 | Not Available | - | 42016 - 44655 | 96459.8 |
| hypothetical protein | PMI12_00044 | Not Available | - | 44680 - 45117 | 16108.6 |
| rhs element vgr protein | PMI12_00045 | Not Available | - | 45126 - 47468 | 86315.8 |
| alcohol dehydrogenase, class iv | PMI12_00046 | Not Available | - | 47610 - 48746 | 39979.2 |
| esterase/lipase | PMI12_00047 | Not Available | + | 48881 - 49795 | 32738.2 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | PMI12_00048 | Not Available | + | 49792 - 50682 | 32703.0 |
| hypothetical protein | PMI12_00049 | Not Available | - | 50676 - 51584 | 32203.7 |
| folate-binding protein ygfz | PMI12_00050 | Not Available | - | 51732 - 52730 | 34251.1 |
| yceg family protein | PMI12_00051 | Not Available | + | 52772 - 53797 | 37051.7 |
| thymidylate kinase | PMI12_00052 | Not Available | + | 53794 - 54450 | 23724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.