Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_00772 | Not Available | Negative | 795328 - 796158 | 30521.8 |
| abc transporter, substrate-binding protein, aliphatic sulfonates family | PMI12_00773 | Not Available | Negative | 796162 - 797133 | 34433.6 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_00774 | Not Available | Negative | 797144 - 797989 | 30603.1 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | PMI12_00775 | Not Available | Negative | 798111 - 799280 | 42119.1 |
| abc transporter, substrate-binding protein, aliphatic sulfonates family | PMI12_00776 | Not Available | Negative | 799280 - 800242 | 33770.9 |
| hypothetical protein | PMI12_00777 | Not Available | Negative | 800271 - 800408 | 4621.61 |
| fmn reductase, ssue family | PMI12_00778 | Not Available | Negative | 800534 - 801118 | 20771.3 |
| sulfate/thiosulfate-binding protein | PMI12_00779 | Not Available | Negative | 801220 - 802272 | 38246.5 |
| fe-s cluster protector protein | PMI12_00780 | Not Available | Positive | 802419 - 802694 | 10324.4 |
| trna biosynthesis protein mnmc c-terminal domain containing protein | PMI12_00781 | Not Available | Positive | 802711 - 804552 | 66158.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.