Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter, atp-binding protein | PMI12_00752 | Not Available | Negative | 776303 - 777400 | 40516.4 |
| sulfate abc transporter, permease protein cysw | PMI12_00753 | Not Available | Negative | 777422 - 778324 | 32517.3 |
| sulfate abc transporter, permease protein cyst | PMI12_00754 | Not Available | Negative | 778326 - 779213 | 31372.3 |
| sulfate/thiosulfate-binding protein | PMI12_00755 | Not Available | Negative | 779213 - 780229 | 36337.0 |
| putative esterase of the alpha/beta hydrolase | PMI12_00756 | Not Available | Negative | 780226 - 780801 | 20511.3 |
| peroxiredoxin | PMI12_00757 | Not Available | Negative | 780941 - 781582 | 23496.8 |
| transcriptional regulator | PMI12_00758 | Not Available | Negative | 781737 - 782651 | 33226.5 |
| acyl carrier protein phosphodiesterase | PMI12_00759 | Not Available | Positive | 782788 - 783435 | 22858.2 |
| putative flavoprotein | PMI12_00760 | Not Available | Negative | 783507 - 784061 | 20093.9 |
| 2-dehydropantoate 2-reductase | PMI12_00761 | Not Available | Positive | 784372 - 785307 | 32659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.