Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iojap-like ribosome-associated protein | PMI12_00742 | Not Available | Negative | 767937 - 768620 | 24143.2 |
| nicotinate/nicotinamide nucleotide adenylyltransferase | PMI12_00743 | Not Available | Negative | 768620 - 769249 | 22457.0 |
| coproporphyrinogen iii oxidase | PMI12_00744 | Not Available | Negative | 769246 - 770163 | 34036.4 |
| phosphoribosylamine--glycine ligase | PMI12_00745 | Not Available | Negative | 770163 - 771461 | 46251.3 |
| dna-binding regulatory protein, yebc/pmpr family | PMI12_00746 | Not Available | Negative | 771508 - 772233 | 26051.6 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_00747 | Not Available | Positive | 772351 - 773139 | 28157.1 |
| putative translation initiation inhibitor, yjgf family | PMI12_00748 | Not Available | Positive | 773142 - 774176 | 37146.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PMI12_00749 | Not Available | Positive | 774218 - 775015 | 29639.1 |
| glycosyl transferase | PMI12_00750 | Not Available | Positive | 774982 - 775758 | 28673.7 |
| disulfide bond formation protein dsbb | PMI12_00751 | Not Available | Negative | 775803 - 776306 | 18367.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.