Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 759655 - 759730 | Not Available |
| dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis | PMI12_00733 | Not Available | Negative | 759779 - 760633 | 29597.3 |
| tol-pal system protein ybgf | PMI12_00734 | Not Available | Negative | 760653 - 761387 | 27326.2 |
| peptidoglycan-associated lipoprotein | PMI12_00735 | Not Available | Negative | 761402 - 761920 | 18408.7 |
| tol-pal system beta propeller repeat protein tolb | PMI12_00736 | Not Available | Negative | 761949 - 763175 | 43599.2 |
| lipid a export permease/atp-binding protein msba | PMI12_00737 | Not Available | Positive | 763430 - 765214 | 64803.3 |
| ribonuclease, rne/rng family | PMI12_00738 | Not Available | Negative | 765211 - 766737 | 56443.1 |
| maf protein | PMI12_00739 | Not Available | Negative | 766745 - 767347 | 21185.4 |
| hypothetical protein | PMI12_00740 | Not Available | Negative | 767351 - 767464 | 3971.54 |
| hypothetical protein | PMI12_00741 | Not Available | Negative | 767461 - 767940 | 17625.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.