Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00722 | Not Available | Positive | 751834 - 752493 | 22570.6 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_00723 | Not Available | Positive | 752578 - 753141 | 19305.6 |
| hypothetical protein | PMI12_00724 | Not Available | Negative | 753204 - 755027 | 60000.0 |
| hypothetical protein | PMI12_00725 | Not Available | Negative | 755395 - 756063 | 24676.9 |
| hypothetical protein | PMI12_00726 | Not Available | Negative | 756229 - 756438 | 7072.3 |
| transposase is66 family | PMI12_00727 | Not Available | Positive | 756482 - 756787 | 11593.3 |
| transposase is66 family | PMI12_00728 | Not Available | Positive | 756732 - 756965 | 8627.31 |
| hypothetical protein | PMI12_00729 | Not Available | Positive | 757131 - 757781 | 22455.4 |
| hypothetical protein | PMI12_00730 | Not Available | Negative | 757892 - 758311 | 14046.4 |
| phage integrase family protein | PMI12_00731 | Not Available | Negative | 758473 - 759474 | 38494.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.