Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00712 | Not Available | Negative | 739034 - 740305 | 43681.8 |
| nucleoside-diphosphate-sugar epimerase | PMI12_00713 | Not Available | Negative | 740309 - 741322 | 35251.3 |
| beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase | PMI12_00714 | Not Available | Negative | 741346 - 742269 | 31416.0 |
| sugar phosphate permease | PMI12_00715 | Not Available | Negative | 742286 - 743620 | 48123.5 |
| transcriptional regulator | PMI12_00716 | Not Available | Negative | 743747 - 744523 | 28193.4 |
| pyruvate dehydrogenase e1 component, homodimeric type | PMI12_00717 | Not Available | Negative | 744582 - 747239 | 96525.6 |
| transcriptional regulator | PMI12_00718 | Not Available | Positive | 747345 - 747812 | 17224.1 |
| putative phosphatase | PMI12_00719 | Not Available | Negative | 747936 - 750203 | 79598.4 |
| membrane-bound lytic murein transglycosylase | PMI12_00720 | Not Available | Negative | 750329 - 751444 | 40827.5 |
| hypothetical protein | PMI12_00721 | Not Available | Positive | 751476 - 751637 | 5761.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.