Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_00702 | Not Available | Positive | 730001 - 730888 | 32093.0 |
| fad/fmn-dependent dehydrogenase | PMI12_00703 | Not Available | Positive | 731009 - 732406 | 50913.8 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_00704 | Not Available | Positive | 732463 - 733488 | 37219.8 |
| putative nadph-quinone reductase (modulator of drug activity b) | PMI12_00705 | Not Available | Positive | 733645 - 734235 | 22632.7 |
| flavodoxin reductase family protein | PMI12_00706 | Not Available | Positive | 734266 - 735225 | 34154.0 |
| transcriptional regulator | PMI12_00707 | Not Available | Positive | 735222 - 735887 | 24809.7 |
| putative translation initiation inhibitor, yjgf family | PMI12_00708 | Not Available | Negative | 735880 - 736350 | 17173.7 |
| cytosine deaminase-like metal-dependent hydrolase | PMI12_00709 | Not Available | Negative | 736347 - 737543 | 42955.3 |
| hydroxypyruvate isomerase | PMI12_00710 | Not Available | Negative | 737540 - 738358 | 30347.2 |
| ribulose-5-phosphate 4-epimerase-like epimerase or aldolase | PMI12_00711 | Not Available | Negative | 738372 - 739037 | 23987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.