Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00692 | Not Available | Positive | 720509 - 721279 | 28910.8 |
| arabinose efflux permease family protein | PMI12_00693 | Not Available | Positive | 721309 - 722934 | 58331.3 |
| putative small integral membrane protein | PMI12_00694 | Not Available | Negative | 722959 - 723273 | 12131.5 |
| heme/copper-type cytochrome/quinol oxidase, subunit 3 | PMI12_00695 | Not Available | Negative | 723282 - 723983 | 25989.8 |
| heme/copper-type cytochrome/quinol oxidase, subunit 3 | PMI12_00696 | Not Available | Negative | 723994 - 724611 | 21876.9 |
| cytochrome c oxidase, subunit i | PMI12_00697 | Not Available | Negative | 724671 - 726467 | 65715.4 |
| heme/copper-type cytochrome/quinol oxidases, subunit 2 | PMI12_00698 | Not Available | Negative | 726464 - 727630 | 42259.1 |
| hypothetical protein | PMI12_00699 | Not Available | Negative | 727678 - 728193 | 18572.7 |
| hypothetical protein, putative amidase | PMI12_00700 | Not Available | Positive | 728388 - 729209 | 30054.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_00701 | Not Available | Positive | 729223 - 730023 | 29569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.