Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | PMI12_00662 | Not Available | Positive | 687935 - 688855 | 33686.2 |
| heat shock protein | PMI12_00663 | Not Available | Positive | 688988 - 689440 | 15261.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | PMI12_00664 | Not Available | Negative | 689460 - 690365 | 32986.5 |
| fructose-bisphosphate aldolase, class ii, calvin cycle subtype | PMI12_00665 | Not Available | Negative | 690572 - 691636 | 38134.8 |
| transcriptional regulator | PMI12_00666 | Not Available | Negative | 691754 - 692284 | 19678.1 |
| 1-aminocyclopropane-1-carboxylate deaminase | PMI12_00667 | Not Available | Positive | 692376 - 693392 | 36699.1 |
| pyruvate kinase | PMI12_00668 | Not Available | Negative | 693472 - 694920 | 51799.8 |
| 3-phosphoglycerate kinase | PMI12_00669 | Not Available | Negative | 695009 - 696202 | 41023.4 |
| transcriptional regulator | PMI12_00670 | Not Available | Negative | 696294 - 697199 | 33376.5 |
| lactoylglutathione lyase-like lyase | PMI12_00671 | Not Available | Positive | 697293 - 697829 | 19754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.