Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00652 | Not Available | Positive | 680069 - 680827 | 27923.0 |
| abc-type polar amino acid transport system, atpase component | PMI12_00653 | Not Available | Positive | 680878 - 681612 | 26840.7 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_00654 | Not Available | Positive | 681656 - 682498 | 30349.9 |
| hypothetical protein | PMI12_00655 | Not Available | Negative | 682366 - 682683 | 11610.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_00656 | Not Available | Negative | 682673 - 683362 | 25729.1 |
| hypothetical protein | PMI12_00657 | Not Available | Negative | 683367 - 684125 | 27808.7 |
| hypothetical protein | PMI12_00658 | Not Available | Negative | 684144 - 684539 | 14136.2 |
| sua5/ycio/yrdc/ywlc family protein | PMI12_00659 | Not Available | Negative | 685150 - 686151 | 34973.0 |
| phosphoribosylaminoimidazole carboxylase, purk protein | PMI12_00660 | Not Available | Negative | 686148 - 687350 | 42433.1 |
| phosphoribosylaminoimidazole carboxylase, pure protein | PMI12_00661 | Not Available | Negative | 687347 - 687898 | 18499.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.