Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00632 | Not Available | Positive | 662692 - 662916 | 8303.07 |
| universal stress protein uspa-like protein | PMI12_00633 | Not Available | Negative | 662942 - 663388 | 15861.4 |
| transcriptional regulator | PMI12_00634 | Not Available | Negative | 663469 - 664017 | 20471.7 |
| hypothetical protein | PMI12_00635 | Not Available | Positive | 664215 - 665198 | 34713.1 |
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI12_00636 | Not Available | Negative | 665319 - 666485 | 42571.1 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_00637 | Not Available | Negative | 666520 - 667233 | 24029.8 |
| hypothetical protein | PMI12_00638 | Not Available | Negative | 667223 - 668194 | 34171.4 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | PMI12_00639 | Not Available | Negative | 668244 - 669182 | 33654.6 |
| transcriptional regulator | PMI12_00640 | Not Available | Positive | 669296 - 670231 | 33395.9 |
| demethylmenaquinone methyltransferase | PMI12_00641 | Not Available | Negative | 670371 - 671042 | 23845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.