Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | PMI12_00622 | Not Available | Positive | 653414 - 653875 | 17061.5 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_00623 | Not Available | Positive | 653872 - 655101 | 43492.3 |
| shikimate 5-dehydrogenase | PMI12_00624 | Not Available | Positive | 655115 - 655936 | 28990.7 |
| 3-dehydroquinate dehydratase, type ii | PMI12_00625 | Not Available | Positive | 655959 - 656405 | 16366.6 |
| hypothetical protein | PMI12_00626 | Not Available | Positive | 657578 - 657973 | 14466.2 |
| saccharopine dehydrogenase-like oxidoreductase | PMI12_00627 | Not Available | Negative | 658097 - 659239 | 41504.9 |
| transcriptional regulator | PMI12_00628 | Not Available | Negative | 659441 - 660361 | 33623.4 |
| transcriptional regulator | PMI12_00629 | Not Available | Positive | 660597 - 661049 | 16690.3 |
| hypothetical protein | PMI12_00630 | Not Available | Positive | 661050 - 661379 | 11973.3 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_00631 | Not Available | Positive | 661512 - 662588 | 39702.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.