Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, atpase component | PMI12_00612 | Not Available | Negative | 629338 - 630933 | 57577.0 |
| rhs family protein | PMI12_00613 | Not Available | Negative | 631008 - 643624 | 449909.0 |
| homing endonuclease-like protein | PMI12_00614 | Not Available | Positive | 643966 - 644718 | 27905.9 |
| hypothetical protein | PMI12_00615 | Not Available | Positive | 645194 - 646804 | 58124.5 |
| hypothetical protein | PMI12_00616 | Not Available | Positive | 646820 - 647830 | 37556.5 |
| nad-dependent aldehyde dehydrogenase | PMI12_00617 | Not Available | Negative | 648281 - 649729 | 50847.2 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_00618 | Not Available | Negative | 649782 - 650804 | 36786.9 |
| transcriptional regulator | PMI12_00619 | Not Available | Negative | 651045 - 651989 | 34648.1 |
| 2-dehydropantoate 2-reductase | PMI12_00620 | Not Available | Positive | 652079 - 653008 | 31984.0 |
| hypothetical protein | PMI12_00621 | Not Available | Positive | 653005 - 653388 | 14095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.