Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| paps reductase/fad synthetase family protein | PMI12_05715 | Not Available | - | 6005520 - 6006140 | 23220.6 |
| hypothetical protein | PMI12_05716 | Not Available | - | 6006161 - 6006556 | 14527.2 |
| sulfite reductase, beta subunit (hemoprotein) | PMI12_05717 | Not Available | - | 6006553 - 6008331 | 66039.1 |
| d-aminopeptidase | PMI12_05718 | Not Available | - | 6008600 - 6009418 | 28865.5 |
| l-aminopeptidase/d-esterase | PMI12_05719 | Not Available | - | 6009435 - 6010493 | 36323.4 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_05720 | Not Available | - | 6010508 - 6011428 | 32983.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_05721 | Not Available | - | 6011439 - 6012359 | 33913.5 |
| abc-type dipeptide transport system, periplasmic component | PMI12_05722 | Not Available | - | 6012439 - 6013992 | 57159.1 |
| atpase component of various abc-type transport systems with duplicated atpase domain | PMI12_05723 | Not Available | - | 6014049 - 6015926 | 68467.5 |
| asparaginase | PMI12_05724 | Not Available | - | 6015967 - 6016926 | 33073.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.