Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00542 | Not Available | + | 545317 - 545622 | 11412.7 |
| hypothetical protein | PMI12_00543 | Not Available | - | 545633 - 546193 | 20657.7 |
| tonb-dependent siderophore receptor | PMI12_00544 | Not Available | - | 546241 - 548409 | 78452.8 |
| putative iron-regulated membrane protein | PMI12_00545 | Not Available | - | 548472 - 549605 | 40840.1 |
| adenylosuccinate lyase | PMI12_00546 | Not Available | - | 549737 - 551116 | 50459.7 |
| glutathione s-transferase | PMI12_00547 | Not Available | + | 551245 - 551856 | 22502.2 |
| glutathione peroxidase | PMI12_00548 | Not Available | - | 552128 - 552742 | 22077.5 |
| hypothetical protein | PMI12_00549 | Not Available | + | 552778 - 553728 | 37113.5 |
| rna polymerase sigma-70 factor, tigr02957 family | PMI12_00550 | Not Available | + | 553873 - 554763 | 33418.9 |
| alkylhydroperoxidase ahpd family core domain containing protein | PMI12_00551 | Not Available | + | 554854 - 555315 | 17350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.