Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenium donor protein | PMI12_05664 | Not Available | + | 5957972 - 5959039 | 36799.8 |
| hypothetical protein | PMI12_05665 | Not Available | - | 5959124 - 5959351 | 6908.29 |
| putative abc-type transport system involved in lysophospholipase l1 biosynthesis, permease component | PMI12_05666 | Not Available | + | 5959556 - 5962072 | 88909.6 |
| hypothetical protein | PMI12_05667 | Not Available | + | 5962162 - 5963748 | 57135.8 |
| transcriptional regulator | PMI12_05668 | Not Available | - | 5963749 - 5964675 | 34110.3 |
| sugar phosphate permease | PMI12_05669 | Not Available | + | 5964783 - 5966294 | 50858.1 |
| transcriptional regulator | PMI12_05670 | Not Available | - | 5966302 - 5967198 | 32872.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05671 | Not Available | + | 5967322 - 5968065 | 25709.6 |
| short-chain alcohol dehydrogenase | PMI12_05672 | Not Available | + | 5968111 - 5969007 | 31558.9 |
| hypothetical protein | PMI12_05673 | Not Available | + | 5969071 - 5969295 | 8560.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.