Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05654 | Not Available | - | 5948494 - 5948626 | 4800.84 |
| abc-type sulfate/molybdate transport system, atpase component | PMI12_05655 | Not Available | + | 5948839 - 5949630 | 28875.9 |
| anaerobic dehydrogenase, typically selenocysteine-containing | PMI12_05656 | Not Available | + | 5949715 - 5952075 | 86535.8 |
| hypothetical protein | PMI12_05657 | Not Available | + | 5952072 - 5952362 | 10343.6 |
| formate dehydrogenase family accessory protein fdhd | PMI12_05658 | Not Available | + | 5952394 - 5953320 | 32416.0 |
| trna 2-selenouridine synthase | PMI12_05659 | Not Available | - | 5953254 - 5954324 | 39315.1 |
| phosphonate abc transporter, permease protein phne | PMI12_05660 | Not Available | - | 5954446 - 5955246 | 28261.1 |
| abc-type phosphate/phosphonate transport system, permease component | PMI12_05661 | Not Available | - | 5955243 - 5956073 | 28896.1 |
| abc-type phosphate/phosphonate transport system, atpase component | PMI12_05662 | Not Available | - | 5956070 - 5956885 | 28304.5 |
| phosphate/phosphite/phosphonate abc transporters, periplasmic binding protein | PMI12_05663 | Not Available | - | 5957028 - 5957888 | 30670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.