Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase | PMI12_05644 | Not Available | - | 5937036 - 5938592 | 53917.8 |
| acyl-coa dehydrogenase | PMI12_05645 | Not Available | - | 5938639 - 5939826 | 43659.6 |
| 3-oxoacid coa-transferase, b subunit | PMI12_05646 | Not Available | - | 5939841 - 5940482 | 22556.2 |
| 3-oxoacid coa-transferase, a subunit | PMI12_05647 | Not Available | - | 5940479 - 5941171 | 24203.9 |
| acetyl-coa acetyltransferase | PMI12_05648 | Not Available | - | 5941194 - 5942345 | 40719.6 |
| putative nucleic-acid-binding protein containing a zn-ribbon | PMI12_05649 | Not Available | - | 5942342 - 5942755 | 14810.8 |
| hypothetical protein | PMI12_05650 | Not Available | - | 5942760 - 5943752 | 35208.6 |
| transcriptional regulator | PMI12_05651 | Not Available | - | 5943940 - 5944854 | 33079.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_05652 | Not Available | - | 5945798 - 5947432 | 59166.5 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05653 | Not Available | - | 5947504 - 5948397 | 30917.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.