Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | PMI12_05624 | Not Available | - | 5918103 - 5918786 | 26199.6 |
| hypothetical protein | PMI12_05625 | Not Available | - | 5919315 - 5919419 | 3713.3 |
| 3-carboxymuconate cyclase | PMI12_05626 | Not Available | - | 5919432 - 5920517 | 38891.9 |
| methylglyoxal synthase | PMI12_05627 | Not Available | - | 5920529 - 5921296 | 27211.7 |
| ribulose-5-phosphate 4-epimerase-like epimerase or aldolase | PMI12_05628 | Not Available | - | 5921392 - 5922078 | 24836.7 |
| transcriptional regulator | PMI12_05629 | Not Available | - | 5922075 - 5922995 | 34777.2 |
| hypothetical protein | PMI12_05630 | Not Available | - | 5923060 - 5924331 | 43748.6 |
| isocitrate/isopropylmalate dehydrogenase | PMI12_05631 | Not Available | - | 5924350 - 5925423 | 38966.9 |
| asp/glu/hydantoin racemase | PMI12_05632 | Not Available | - | 5925465 - 5926049 | 20552.8 |
| hypothetical protein | PMI12_05633 | Not Available | + | 5926264 - 5927274 | 35592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.