Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase, large subunit, biosynthetic type | PMI12_05604 | Not Available | + | 5894342 - 5896129 | 63981.3 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_05605 | Not Available | - | 5896175 - 5896558 | 13960.4 |
| l-aspartate-alpha-decarboxylase | PMI12_05606 | Not Available | + | 5896738 - 5897139 | 14437.2 |
| putative calcium-binding protein | PMI12_05607 | Not Available | + | 5897650 - 5899465 | 60291.3 |
| hypothetical protein | PMI12_05608 | Not Available | - | 5900013 - 5900624 | 22633.5 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_05609 | Not Available | - | 5900751 - 5901935 | 43742.3 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_05610 | Not Available | - | 5902006 - 5902863 | 30736.6 |
| hypothetical protein | PMI12_05611 | Not Available | - | 5902953 - 5903240 | 11042.4 |
| acetyl-coa acetyltransferase | PMI12_05612 | Not Available | - | 5903351 - 5904535 | 40789.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_05613 | Not Available | - | 5904927 - 5906621 | 62233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.