Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus modification protein pilv | PMI12_00532 | Not Available | - | 537125 - 537550 | 14882.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_00533 | Not Available | - | 537550 - 538149 | 20923.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_00534 | Not Available | - | 538149 - 538613 | 16330.4 |
| lipid a core-o-antigen ligase-like enyme | PMI12_00535 | Not Available | + | 538774 - 540474 | 60603.8 |
| molybdenum cofactor biosynthesis protein moac | PMI12_00536 | Not Available | - | 540498 - 540980 | 16451.1 |
| putative zn-dependent protease | PMI12_00537 | Not Available | + | 541155 - 542597 | 52096.5 |
| putative membrane protein | PMI12_00538 | Not Available | - | 542607 - 542963 | 12272.9 |
| hypothetical protein | PMI12_00539 | Not Available | - | 543052 - 543516 | 17012.6 |
| integral membrane protein, yjbe family | PMI12_00540 | Not Available | - | 543595 - 544338 | 26037.8 |
| putative fe-s protein | PMI12_00541 | Not Available | + | 544841 - 545314 | 17855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.