Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (ndp forming) | PMI12_05553 | Not Available | + | 5831957 - 5834089 | 73152.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05554 | Not Available | + | 5834086 - 5834850 | 26478.9 |
| lactoylglutathione lyase family protein | PMI12_05555 | Not Available | + | 5834847 - 5835236 | 13655.2 |
| hypothetical protein | PMI12_05556 | Not Available | + | 5835233 - 5835784 | 20694.4 |
| acyl-coa dehydrogenase | PMI12_05557 | Not Available | + | 5835781 - 5836947 | 42011.6 |
| metabolite-proton symporter | PMI12_05558 | Not Available | - | 5836956 - 5838296 | 47946.1 |
| response regulator | PMI12_05559 | Not Available | - | 5838446 - 5839060 | 22342.0 |
| pas domain s-box | PMI12_05560 | Not Available | - | 5839057 - 5841237 | 80237.2 |
| transcriptional regulator | PMI12_05561 | Not Available | + | 5841354 - 5842241 | 33047.0 |
| hypothetical protein | PMI12_05562 | Not Available | + | 5842468 - 5842794 | 12202.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.