Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain protein containing protein | PMI12_05533 | Not Available | + | 5811228 - 5813411 | 81456.4 |
| hypothetical protein | PMI12_05534 | Not Available | + | 5813414 - 5813797 | 14636.2 |
| transcriptional regulator | PMI12_05535 | Not Available | - | 5814160 - 5814867 | 25499.6 |
| na+/h+ dicarboxylate symporter | PMI12_05536 | Not Available | - | 5814891 - 5816231 | 46513.5 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_05537 | Not Available | + | 5816481 - 5817524 | 36454.5 |
| gluconolactonase | PMI12_05538 | Not Available | - | 5817786 - 5819000 | 43255.2 |
| hypothetical protein | PMI12_05539 | Not Available | - | 5819043 - 5819336 | 10999.4 |
| hypothetical protein | PMI12_05540 | Not Available | - | 5819351 - 5819821 | 16852.5 |
| transcriptional regulator | PMI12_05541 | Not Available | + | 5820064 - 5820969 | 32529.2 |
| phage integrase protein | PMI12_05542 | Not Available | + | 5821364 - 5821642 | 10527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.