Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase, deaminating | PMI12_05491 | Not Available | - | 5762906 - 5764207 | 47278.6 |
| dtdp-glucose 4,6-dehydratase | PMI12_05494 | Not Available | + | 5764623 - 5765693 | 39912.0 |
| dtdp-4-dehydrorhamnose reductase | PMI12_05495 | Not Available | + | 5765690 - 5766580 | 32055.2 |
| glucose-1-phosphate thymidylyltransferase, short form | PMI12_05496 | Not Available | + | 5766601 - 5767497 | 32815.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PMI12_05497 | Not Available | + | 5767494 - 5768042 | 20485.2 |
| glycosyl transferase | PMI12_05498 | Not Available | + | 5768108 - 5771026 | 106927.0 |
| glycosyltransferase | PMI12_05499 | Not Available | + | 5771292 - 5772953 | 60875.4 |
| hypothetical protein | PMI12_05500 | Not Available | + | 5772950 - 5773828 | 32574.9 |
| hypothetical protein | PMI12_05501 | Not Available | + | 5773864 - 5774649 | 29628.3 |
| hypothetical protein | PMI12_05502 | Not Available | - | 5774696 - 5776054 | 50037.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.