Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_00522 | Not Available | + | 520802 - 521272 | 15733.0 |
| hypothetical protein | PMI12_00523 | Not Available | + | 521354 - 523456 | 76661.4 |
| glycosyl transferase | PMI12_00524 | Not Available | + | 523541 - 524863 | 47207.8 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI12_00525 | Not Available | + | 524860 - 525969 | 40800.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | PMI12_00526 | Not Available | + | 526655 - 528055 | 49880.0 |
| glycosyl transferase | PMI12_00527 | Not Available | + | 528860 - 529837 | 35857.1 |
| glycosyl transferase | PMI12_00528 | Not Available | - | 529846 - 530754 | 34541.7 |
| tfp pilus assembly protein, tip-associated adhesin pily1 | PMI12_00529 | Not Available | - | 531050 - 535240 | 148251.0 |
| hypothetical protein | PMI12_00530 | Not Available | - | 535255 - 535899 | 22247.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_00531 | Not Available | - | 535896 - 537128 | 42294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.