Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase component of uncharacterized abc-type transporter | PMI12_05441 | Not Available | - | 5700852 - 5702459 | 56648.6 |
| nucleoside phosphorylase | PMI12_05442 | Not Available | - | 5702506 - 5703477 | 34807.2 |
| putative xylanase/chitin deacetylase | PMI12_05443 | Not Available | - | 5703474 - 5706287 | 100427.0 |
| putative abc-type transport system, periplasmic component/surface lipoprotein | PMI12_05444 | Not Available | - | 5706298 - 5707299 | 35921.4 |
| hypothetical protein | PMI12_05445 | Not Available | + | 5707380 - 5707533 | 5495.36 |
| signal transduction histidine kinase regulating c4-dicarboxylate transport system | PMI12_05446 | Not Available | + | 5707610 - 5709466 | 66465.7 |
| response regulator with chey-like receiver, aaa-type atpase, and dna-binding domains | PMI12_05447 | Not Available | + | 5709474 - 5710850 | 50660.9 |
| nad+ synthetase | PMI12_05448 | Not Available | - | 5710869 - 5711708 | 29979.0 |
| outer membrane phospholipase a | PMI12_05449 | Not Available | - | 5711829 - 5713007 | 43281.9 |
| hypothetical protein | PMI12_05450 | Not Available | - | 5713004 - 5713468 | 16006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.