Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05399 | Not Available | + | 5671979 - 5674254 | 70973.1 |
| type ii secretory pathway, component puld | PMI12_05400 | Not Available | - | 5674338 - 5675144 | 28202.6 |
| hypothetical protein | PMI12_05401 | Not Available | + | 5675196 - 5675415 | 8010.82 |
| rhs element vgr protein | PMI12_05402 | Not Available | + | 5675416 - 5676431 | 38473.2 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_05403 | Not Available | + | 5676432 - 5677317 | 31088.8 |
| abc-type uncharacterized transport system, duplicated atpase component | PMI12_05404 | Not Available | + | 5677326 - 5677830 | 18240.3 |
| hemagglutinin-like protein | PMI12_05405 | Not Available | + | 5677832 - 5678658 | 26177.4 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_05406 | Not Available | + | 5678659 - 5679243 | 20458.1 |
| hypothetical protein | PMI12_05407 | Not Available | + | 5679240 - 5679312 | 2656.21 |
| outer membrane protein (porin) | PMI12_05408 | Not Available | - | 5679437 - 5680594 | 39989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.